Sequence and structural patterns detected in entangled proteins

Baiesi, Marco and Orlandini, Enzo and Seno, Flavio and Trovato, Antonio (2019) Sequence and structural patterns detected in entangled proteins. [Data Collection]

Collection description

Data repository related to the manuscript "Sequence and structural patterns detected in entangled proteins reveal the importance of co-translational folding"

DOI:	10.25430/researchdata.cab.unipd.it.00000123
Keywords:	protein folding; linking number; entanglement; co-translational folding
Subjects:	Life Sciences > Genetics, 'Omics', Bioinformatics and Systems Biology: Molecular genetics, quantitative genetics, genetic epidemiology, epigenetics, genomics, metagenomics, glycomics, bioinformatics, computational biology, biostatistics, systems biology proteomics, metab > Computational biology Physical:Sciences and Engineering > Condensed Matter Physics: Structure, electronic properties, fluids, nanosciences, biological physics > Statistical physics: phase transitions, noise and fluctuations, models of complex systems, etc. Physical:Sciences and Engineering > Condensed Matter Physics: Structure, electronic properties, fluids, nanosciences, biological physics > Physics of biological systems
Department:	Departments > Dipartimento di Fisica e Astronomia "Galileo Galilei" (DFA)
Depositing User:	Antonio Trovato
Date Deposited:	24 Apr 2019 07:19
Last Modified:	27 Nov 2019 07:13
Creators/Authors:	Creators Email ORCID Baiesi, Marco marco.baiesi@unipd.it orcid.org/0000-0002-4513-9191 Orlandini, Enzo enzo.orlandini@unipd.it orcid.org/0000-0003-3680-9488 Seno, Flavio flavio.seno@unipd.it orcid.org/0000-0002-9095-4726 Trovato, Antonio antonio.trovato@unipd.it orcid.org/0000-0002-1596-9477
Type of data:	Text
Collection period:	From To 2018 2019
Resource language:	English
Metadata language:	English
Publisher:	Research Data Unipd
Related publications:	https://www.nature.com/articles/s41598-0... (Publisher)
Date:	18 April 2019
Copyright holders:	The Author
URI:	https://researchdata.cab.unipd.it/id/eprint/123
Additional details Additional details Creators/Authors: Creators Email ORCID Baiesi, Marco marco.baiesi@unipd.it orcid.org/0000-0002-4513-9191 Orlandini, Enzo enzo.orlandini@unipd.it orcid.org/0000-0003-3680-9488 Seno, Flavio flavio.seno@unipd.it orcid.org/0000-0002-9095-4726 Trovato, Antonio antonio.trovato@unipd.it orcid.org/0000-0002-1596-9477 Type of data: Text Collection period: From To 2018 2019 Resource language: English Metadata language: English Publisher: Research Data Unipd Related publications: https://www.nature.com/articles/s41598-0... (Publisher) Date: 18 April 2019 Copyright holders: The Author Last Modified: 27 Nov 2019 07:13

Available Files

Data

G1_Lk_prot.txt G1_Lk_prot.txt G1_Lk_prot.txt Visible to: Anyone Content type: Data Description: Values of entanglement indicators evaluated for protein domains Metadata Revision: 2 Mime-Type: text/plain License: Creative Commons: Attribution 4.0 File size: 898kB

G1_loop.txt G1_loop.txt G1_loop.txt Visible to: Anyone Content type: Data Description: Values of entanglement indicators evaluated for loops in protein domains Metadata Revision: 2 Mime-Type: text/plain License: Creative Commons: Attribution 4.0 File size: 137MB

counting_and_potential_G1.dat counting_and_potential_G1.dat counting_and_potential_G1.dat Visible to: Anyone Content type: Data Description: Counting and scores for statistical potentials Metadata Revision: 2 Mime-Type: text/plain License: Creative Commons: Attribution 4.0 File size: 11kB

Read me

counting_and_po ... ntial_G1.README counting_and_po ... ntial_G1.README counting_and_po ... ntial_G1.README Visible to: Anyone Content type: Readme Description: README - Counting and scores for statistical potentials Metadata Revision: 2 Mime-Type: text/plain License: Creative Commons: Attribution 4.0 File size: 549B